PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009782595.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Dof
Protein Properties Length: 247aa    MW: 27700.9 Da    PI: 7.3331
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009782595.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof127.15.1e-402584362
          zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    e+a+kcprCdstntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rknk+ s
  XP_009782595.1 25 EQAQKCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRIS 84
                    7899*****************************************************976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074785.0E-292282IPR003851Zinc finger, Dof-type
PfamPF027019.7E-342682IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.2832882IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103066IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MSCQTLENML AYTNKQEKKP RPGAEQAQKC PRCDSTNTKF CYYNNYSLTQ PRYFCKSCRR  60
YWTKGGTLRN VPVGGGCRKN KRISSKKSQL DHESIANSAN YPLSSFTPLS CYESSDLSLA  120
FAKLQKQASG NLGIEENDMS MMCSNVYYDD FLGAQRGGFL ELTSNGFHHN MYYGKGNDGN  180
LGQVENGEIM GLNVNAEMGM LYDQEMIFPW QINGEVNNMS DFEASNRQNS NGFDSSFHGL  240
NHSGLIA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009782595.10.0PREDICTED: dof zinc finger protein DOF5.3-like
RefseqXP_016479436.10.0PREDICTED: dof zinc finger protein DOF5.3-like
TrEMBLA0A0L9V6Q46e-76A0A0L9V6Q4_PHAAN; Uncharacterized protein
TrEMBLA0A0S3SCW37e-76A0A0S3SCW3_PHAAN; Uncharacterized protein
STRINGPGSC0003DMT4000194167e-73(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.16e-44TARGET OF MONOPTEROS 6